Protein ZmABI19
ZmABI19 is a protein in the ABI3-VP1 family.
Information
TF Name: ZmABI19
Species: Maize
TF Family: ABI3-VP1
Gene Name(Synonym): ABI19
Uniprot ID: K7V4V9

Protein ZmABI19

ZmABI19 is a protein in the ABI3-VP1 family.

Overview of domains present in v5 transcripts
PF02362
Zm00001eb361390_T001
Zm00001eb361390_T002
Zm00001eb361390_T003

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d011712DAPseq no logo sequence fimo position
Zm00001d011712DAPseq no logo sequence fimo position
Zm00001d011712ChIPseq no logo sequence fimo position
Zm00001d011712PChIPseq no logo sequence fimo position

Interactions where ZmABI19 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmABI19 is the target  
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There are 66 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb361390_T001 from maize genome v5

Amino Acid Sequence
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MPARASHPALATSRARGWPRLRALGIAPDGGRWRCLPHFAPISEPARHLSPRAPASASPPARPHPAIKASPSPTLAAAAA
AAAAATSSLPSFSARRRSTGMAGITKRRTSPASTSSSSGDVLPQRVTRKRRSARRGPRSTARRPSAPPPMNELDLNTAAL
DPDHYATGLRVLLQKELRNSDVSQLGRIVLPKKEAESYLPILMAKDGKSLCMHDLLNSQLWTFKYRYWFNNKSRMYVLEN
TGDYVKAHDLQQGDFIVIYKDDENNRFVIGAKKAGDEQTATVPQVHEHMHISAALPAPQAFHDYAGPVAAEAGMLAIVPQ
GDEIFDGILNSLPEIPVANVRYSDFFDPFGDSMDMANPLSSSNNPSVNLATHFHDERIGSCSFPYPKSGPQM

MPARASHPALATSRARGWPRLRALGIAPDGGRWRCLPHFAPISEPARHLSPRAPASASPPARPHPAIKASPSPTLAAAAA
AAAAATSSLPSFSARRRSTGMAGITKRRTSPASTSSSSGDVLPQRVTRKRRSARRGPRSTARRPSAPPPMNELDLNTAAL
DPDHYATGLRVLLQKELRNSDVSQLGRIVLPKKEAESYLPILMAKDGKSLCMHDLLNSQLWTFKYRYWFNNKSRMYVLEN
TGDYVKAHDLQQGDFIVIYKDDENNRFVIGAKKAGDEQTATVPQVHEHMHISAALPAPQAFHDYAGPVAAEAGMLAIVPQ
GDEIFDGILNSLPEIPVANVRYSDFFDPFGDSMDMANPLSSSNNPSVNLATHFHDERIGSCSFPYPKSGPQM

MPARASHPALATSRARGWPRLRALGIAPDGGRWRCLPHFAPISEPARHLSPRAPASASPPARPHPAIKASPSPTLAAAAA
AAAAATSSLPSFSARRRSTGMAGITKRRTSPASTSSSSGDVLPQRVTRKRRSARRGPRSTARRPSAPPPMNELDLNTAAL
DPDHYATGLRVLLQKELRNSDVSQLGRIVLPKKEAESYLPILMAKDGKSLCMHDLLNSQLWTFKYRYWFNNKSRMYVLEN
TGDYVKAHDLQQGDFIVIYKDDENNRFVIGAKKAGDEQTATVPQVHEHMHISAALPAPQAFHDYAGPVAAEAGMLAIVPQ
GDEIFDGILNSLPEIPVANVRYSDFFDPFGDSMDMANPLSSSNNPSVNLATHFHDERIGSCSFPYPKSGPQM

MPARASHPALATSRARGWPRLRALGIAPDGGRWRCLPHFAPISEPARHLSPRAPASASPPARPHPAIKASPSPTLAAAAA
AAAAATSSLPSFSARRRSTGMAGITKRRTSPASTSSSSGDVLPQRVTRKRRSARRGPRSTARRPSAPPPMNELDLNTAAL
DPDHYATGLRVLLQKELRNSDVSQLGRIVLPKKEAESYLPILMAKDGKSLCMHDLLNSQLWTFKYRYWFNNKSRMYVLEN
TGDYVKAHDLQQGDFIVIYKDDENNRFVIGAKKAGDEQTATVPQVHEHMHISAALPAPQAFHDYAGPVAAEAGMLAIVPQ
GDEIFDGILNSLPEIPVANVRYSDFFDPFGDSMDMANPLSSSNNPSVNLATHFHDERIGSCSFPYPKSGPQM

MPARASHPALATSRARGWPRLRALGIAPDGGRWRCLPHFAPISEPARHLSPRAPASASPPARPHPAIKASPSPTLAAAAA
AAAAATSSLPSFSARRRSTGMAGITKRRTSPASTSSSSGDVLPQRVTRKRRSARRGPRSTARRPSAPPPMNELDLNTAAL
DPDHYATGLRVLLQKELRNSDVSQLGRIVLPKKEAESYLPILMAKDGKSLCMHDLLNSQLWTFKYRYWFNNKSRMYVLEN
TGDYVKAHDLQQGDFIVIYKDDENNRFVIGAKKAGDEQTATVPQVHEHMHISAALPAPQAFHDYAGPVAAEAGMLAIVPQ
GDEIFDGILNSLPEIPVANVRYSDFFDPFGDSMDMANPLSSSNNPSVNLATHFHDERIGSCSFPYPKSGPQM

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF02362
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Nucleotide Sequence
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GCGCGGAGGCTGAAAGCTGAAGCGC...

GRMZM2G035701_T01 from maize genome v3


Related TFome: pUT6084

Amino Acid Sequence
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MAGITKRRTSPASTSSSSGDVLPQRVTRKRRSARRGPRSTARRPSAPPPMNELDLNTAALDPDHYATGLRVLLQKELRNS
DVSQLGRIVLPKKEAESYLPILMAKDGKSLCMHDLLNSQLWTFKYRYWFNNKSRMYVLENTGDYVKAHDLQQGDFIVIYK
DDENNRFVIGAKKAGDEQTATVPQVHEHMHISAALPAPQAFHDYAGPVAAEAGMLAIVPQGDEIFDGILNSLPEIPVANV
RYSDFFDPFGDSMDMANPLSSSNNPSVNLATHFHDERIGSCSFPYPKSGPQM

Nucleotide Sequence
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CTTCCTTCCTTCTCCGCTCGTCGTC...

Zm00001d011712_T001 from maize genome v4

Amino Acid Sequence
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MPARASHPALATSRARGWPRLRALGIAPDGGRWRCLPHFAPISEPARHLSPRAPASASPPARPHPAIKASPSPTLAAAAA
AAAAATSSLPSFSARRRSTGMAGITKRRTSPASTSSSSGDVLPQRVTRKRRSARRGPRSTARRPSAPPPMNELDLNTAAL
DPDHYATGLRVLLQKELRNSDVSQLGRIVLPKKEAESYLPILMAKDGKSLCMHDLLNSQLWTFKYRYWFNNKSRMYVLEN
TGDYVKAHDLQQGDFIVIYKDDENNRFVIGAKKAGDEQTATVPQVHEHMHISAALPAPQAFHDYAGPVAAEAGMLAIVPQ
GDEIFDGILNSLPEIPVANVRYSDFFDPFGDSMDMANPLSSSNNPSVNLATHFHDERIGSCSFPYPKSGPQM

Nucleotide Sequence
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GCCACAGAGCGCGCGGTGCCGGGGG...

Zm00001d011712_T002 from maize genome v4

Amino Acid Sequence
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MAGITKRRTSPASTSSSSGDVLPQRVTRKRRSARRGPRSTARRPSAPPPMNELDLNTAALDPDHYATGLRVLLQKELRNS
DVSQLGRIKEAESYLPILMAKDGKSLCMHDLLNSQLWTFKYRYWFNNKSRMYVLENTGDYVKAHDLQQGDFIVIYKDDEN
NRFVIGAKKAGDEQTATVPQVHEHMHISAALPAPQAFHDYAGPVAAEAGMLAIVPQGDEIFDGILNSLPEIPVANVRYSD
FFDPFGDSMDMANPLSSSNNPSVNLATHFHDERIGSCSFPYPKSGPQM

Nucleotide Sequence
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GCTGCCGCTGCCGCCGCCGCCGCTA...

Zm00001d011712_T003 from maize genome v4

Amino Acid Sequence
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MAGITKRRTSPASTSSSSGDVLPQRVTRKRRSARRGPRSTARRPSAPPPMNELDLNTAALDPDHYATGLRVLLQKELRNS
DVSQLGRIVLPKKEAESYLPILMAKDGKSLCMHDLLNSQLWTFKYRMYVLENTGDYVKAHDLQQGDFIVIYKDDENNRFV
IGAKKAGDEQTATVPQVHEHMHISAALPAPQAFHDYAGPVAAEAGMLAIVPQGDEIFDGILNSLPEIPVANVRYSDFFDP
FGDSMDMANPLSSSNNPSVNLATHFHDERIGSCSFPYPKSGPQM

Nucleotide Sequence
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GCTGCCGCTGCCGCCGCCGCCGCTA...

Zm00001d011712_T004 from maize genome v4

Amino Acid Sequence
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MKVIGAKKAGDEQTATVPQVHEHMHISAALPAPQAFHDYAGPVAAEAGMLAIVPQGDEIFDGILNSLPEIPVANVRYSDF
FDPFGDSMDMANPLSSSNNPSVNLATHFHDERIGSCSFPYPKSGPQM

Nucleotide Sequence
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GCTGCCGCTGCCGCCGCCGCCGCTA...

Zm00001eb361390_T002 from maize genome v5

Amino Acid Sequence
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MAGITKRRTSPASTSSSSGDVLPQRVTRKRRSARRGPRSTARRPSAPPPMNELDLNTAALDPDHYATGLRVLLQKELRNS
DVSQLGRIVLPKKEAESYLPILMAKDGKSLCMHDLLNSQLWTFKYRMYVLENTGDYVKAHDLQQGDFIVIYKDDENNRFV
IGAKKAGDEQTATVPQVHEHMHISAALPAPQAFHDYAGPVAAEAGMLAIVPQGDEIFDGILNSLPEIPVANVRYSDFFDP
FGDSMDMANPLSSSNNPSVNLATHFHDERIGSCSFPYPKSGPQM

Nucleotide Sequence
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GCTGCCGCTGCCGCCGCCGCCGCTA...

Zm00001eb361390_T003 from maize genome v5

Amino Acid Sequence
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MAGITKRRTSPASTSSSSGDVLPQRVTRKRRSARRGPRSTARRPSAPPPMNELDLNTAALDPDHYATGLRVLLQKELRNS
DVSQLGRIKEAESYLPILMAKDGKSLCMHDLLNSQLWTFKYRYWFNNKSRMYVLENTGDYVKAHDLQQGDFIVIYKDDEN
NRFVIGAKKAGDEQTATVPQVHEHMHISAALPAPQAFHDYAGPVAAEAGMLAIVPQGDEIFDGILNSLPEIPVANVRYSD
FFDPFGDSMDMANPLSSSNNPSVNLATHFHDERIGSCSFPYPKSGPQM

Nucleotide Sequence
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TGCCGCTGCCGCCGCCGCCGCTACC...

Zm00001eb361400_T001 from maize genome v5

Amino Acid Sequence
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MLYLYVQPISLSYLLTHIIRLLTCPHDCKADNHSTALYYCSCQNTLIFVSPISSKRNGTAKSIISANLHMAPTSSDPSNN
AAENSNLLYERDLTLSNLFISNMEK

Nucleotide Sequence
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GTGAACATTGCGTTAAAAAAAATAC...


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